STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0376annotation not available (259 aa)    
Predicted Functional Partners:
XCC0320
annotation not available
  
     0.724
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants
  
     0.681
XCC3474
Outer membrane receptor for monomeric catechols
  
     0.644
CAP52000.1
Phage-related minor tail protein
  
     0.616
CAP52472.1
Type V secretory pathway, adhesin AidA
  
     0.598
moxJ
annotation not available
  
     0.568
XCC3476
Surface antigen protein
  
     0.566
xcsC
Type II secretory pathway component PulC
  
     0.559
XCC1430
annotation not available
  
     0.551
xcsH
Type II secretion system protein H; General secretory pathway proteins G and H and related periplasmic/secreted proteins
  
     0.532
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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