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STRINGSTRING
CAP49751.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP49751.1" - Transposase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP49751.1Transposase (394 aa)    
Predicted Functional Partners:
XCC0392
Integrase (148 aa)
   
        0.711
CAP51421.1
Transposase and inactivated derivatives (68 aa)
   
          0.451
XCC3092
Plasmid stabilization system protein (100 aa)
   
          0.446
XCC1064
annotation not available (228 aa)
   
          0.408
CAP51727.1
Transposase and inactivated derivatives, TnpA family (986 aa)
   
          0.400
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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