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tbp protein (Xanthomonas campestris campestris) - STRING interaction network
"tbp" - Outer membrane receptor proteins, mostly Fe transport in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbpOuter membrane receptor proteins, mostly Fe transport (871 aa)    
Predicted Functional Partners:
CAP49757.1
annotation not available (63 aa)
              0.761
sufS
Isopenicillin N epimerase; Selenocysteine lyase (431 aa)
 
        0.741
XCC4040
Uncharacterized protein conserved in bacteria (605 aa)
   
          0.587
XCC2407
annotation not available (618 aa)
   
          0.587
iroN
Outer membrane receptor proteins, mostly Fe transport (1003 aa)
   
   
  0.578
XCC1345
Uncharacterized protein conserved in bacteria (644 aa)
   
          0.548
XCC1037
Outer membrane receptor proteins mostly Fe transport (738 aa)
   
        0.534
XCC2887
Outer membrane receptor proteins mostly Fe transport (913 aa)
   
   
  0.523
XCC2408
Uncharacterized protein conserved in bacteria (608 aa)
   
          0.514
XCC0119
Outer membrane receptor proteins mostly Fe transport (922 aa)
   
   
  0.501
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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