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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdoBPhosphoglycerol transferase I; Transfers a phosphoglycerol residue from phosphatidylglycerol to the membrane-bound nascent glucan backbones; Belongs to the OpgB family (702 aa)    
Predicted Functional Partners:
XCC1323
Putative membrane protein
     
 0.656
XCC3871
Mn2+-dependent serine/threonine protein kinase
 
     0.652
CAP49766.1
annotation not available
       0.629
XCC0439
annotation not available
  
     0.574
nucA
DNA/RNA endonuclease G NUC1
  
     0.514
yjdB
Inner membrane protein; Predicted membrane-associated metal-dependent hydrolase
   
 
 0.506
CAP52000.1
Phage-related minor tail protein
  
     0.502
CAP52472.1
Type V secretory pathway, adhesin AidA
  
     0.479
tyrA
Chorismate mutase/prephenate dehydrogenase; Prephenate dehydrogenase
 
     0.469
XCC2469
Outer membrane receptor proteins mostly Fe transport
  
     0.461
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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