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acrB protein (Xanthomonas campestris campestris) - STRING interaction network
"acrB" - Cation/multidrug efflux pump in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrBCation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1032 aa)    
Predicted Functional Partners:
acrA1
Component of multidrug efflux system; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (371 aa)
 
 
  0.983
ameR
Transcriptional regulator (207 aa)
 
          0.910
oprN1
Outer membrane protein (490 aa)
 
 
  0.878
XCC0423
Oxidoreductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family (268 aa)
 
          0.753
mexA
Multidrug resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (399 aa)
 
 
  0.693
raxC
Outer membrane protein (457 aa)
   
 
  0.687
XCC1439
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (396 aa)
 
 
  0.682
XCC2027
Transcriptional regulator (184 aa)
 
     
  0.630
acrA2
Multidrug resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (436 aa)
   
 
  0.551
yajC
Preprotein translocase subunit YajC (117 aa)
       
 
  0.539
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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