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XCC0423 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0423" - Oxidoreductase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0423Oxidoreductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family (268 aa)    
Predicted Functional Partners:
acrA1
Component of multidrug efflux system; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (371 aa)
 
          0.832
ameR
Transcriptional regulator (207 aa)
 
          0.809
CAP49788.1
annotation not available (72 aa)
              0.796
XCC0424
annotation not available (165 aa)
              0.796
acrB
Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1032 aa)
 
          0.753
oprN1
Outer membrane protein (490 aa)
 
          0.619
fabB
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the beta-ketoacyl-ACP synthases family (402 aa)
   
 
  0.506
fabF1
3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (411 aa)
   
 
  0.506
XCC2027
Transcriptional regulator (184 aa)
 
          0.499
XCC3999
annotation not available (257 aa)
   
 
  0.495
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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