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STRINGSTRING
XCC0428 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0428" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0428annotation not available (127 aa)    
Predicted Functional Partners:
pdhA
Pyruvate/2-oxoglutarate dehydrogenase complex,dehydrogenase (E1) component, eukaryotic type, alpha subunit (362 aa)
              0.860
pdhB
Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit (356 aa)
              0.860
pdhC
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Transposase and inactivated derivatives (502 aa)
              0.859
XCC2403
annotation not available (98 aa)
   
          0.699
XCC3897
annotation not available (259 aa)
   
          0.659
XCC3915
Uncharacterized protein; Hydrolases of the alpha/beta superfamily (373 aa)
   
          0.656
XCC3589
annotation not available (725 aa)
   
          0.637
oprP1
Phosphate-selective porin (397 aa)
   
          0.632
XCC0767
annotation not available (81 aa)
   
          0.617
XCC1130
Uncharacterized small membrane protein (134 aa)
   
          0.592
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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