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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0431Nuclease; Predicted extracellular nuclease (1193 aa)    
Predicted Functional Partners:
XCC3374
annotation not available
  
     0.691
XCC0521
Ribonuclease; Endonuclease I
   
 0.641
XCC0240
annotation not available
  
    0.635
XCC0955
Peptidyl-Asp metalloendopeptidase; Metalloprotease, specifically cleaves on the N-terminal side of aspartyl, glutamyl and cysteic acid residues
  
   
 0.607
celS2
Glycoside hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family
  
    0.593
XCC0715
annotation not available
  
     0.588
XCC0449
Lytic enzyme; RTX toxins and related Ca2+-binding proteins
 
     0.570
gumN
Uncharacterized protein conserved in bacteria
  
     0.566
XCC1115
annotation not available
  
     0.566
XCC2016
Uncharacterized protein
  
     0.559
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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