STRINGSTRING
XCC0434 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0434" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0434annotation not available (196 aa)    
Predicted Functional Partners:
yhiP
Di-tripeptide transporter; Dipeptide/tripeptide permease (506 aa)
     
      0.836
XCC2762
annotation not available (198 aa)
   
          0.729
XCC2192
annotation not available (101 aa)
   
          0.693
uptE
Outer membrane protein; RTX toxins and related Ca2+-binding proteins (296 aa)
   
     
  0.690
XCC2621
annotation not available (208 aa)
   
          0.683
XCC2715
annotation not available (153 aa)
   
          0.682
XCC1572
annotation not available (228 aa)
   
          0.677
XCC3958
annotation not available (150 aa)
   
          0.653
XCC4090
annotation not available (299 aa)
   
          0.649
XCC0274
annotation not available (143 aa)
   
          0.646
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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