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phaD protein (Xanthomonas campestris campestris) - STRING interaction network
"phaD" - PhaD protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaDPhaD protein; Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit (519 aa)    
Predicted Functional Partners:
phaE
PhaE protein; Multisubunit Na+/H+ antiporter MnhE subunit (168 aa)
 
  0.997
phaC
PhaC protein; Multisubunit Na+/H+ antiporter MnhC subunit (125 aa)
 
  0.997
phaG
Uncharacterized protein; Multisubunit Na+/H+ antiporter MnhG subunit (140 aa)
 
 
  0.995
phaF
PhaF protein; Multisubunit Na+/H+ antiporter MnhF subunit (94 aa)
 
 
  0.993
phaA
NADH-ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit (942 aa)
 
0.986
nuoI
NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (163 aa)
   
 
  0.672
XCC0447
Uncharacterized protein; Predicted nucleoside-diphosphate-sugar epimerases (321 aa)
     
      0.631
nuoL
NADH-ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit (720 aa)
 
 
  0.564
sdeB
Atrazine chlorohydrolase; Cytosine deaminase and related metal-dependent hydrolases (456 aa)
           
  0.432
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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