STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0447Uncharacterized protein; Predicted nucleoside-diphosphate-sugar epimerases (321 aa)    
Predicted Functional Partners:
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase
 
 
 0.638
phaD
PhaD protein; Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit
   
   0.631
phaA
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit
  
  
 0.611
phaF
PhaF protein; Multisubunit Na+/H+ antiporter MnhF subunit
       0.606
phaC
PhaC protein; Multisubunit Na+/H+ antiporter MnhC subunit
       0.606
phaG
Uncharacterized protein; Multisubunit Na+/H+ antiporter MnhG subunit
       0.604
phaE
PhaE protein; Multisubunit Na+/H+ antiporter MnhE subunit
       0.602
XCC2933
Glycosyl transferase; Unnamed protein product
 
 
 0.522
CAP52000.1
Phage-related minor tail protein
  
     0.503
vipA
Polysaccharide biosynthetic protein; UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family
  
 
 0.494
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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