STRINGSTRING
XCC0449 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0449" - Lytic enzyme in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0449Lytic enzyme; RTX toxins and related Ca2+-binding proteins (576 aa)    
Predicted Functional Partners:
xcc-b100_1236
Acetyltransferases, including N-acetylases of ribosomal proteins (635 aa)
   
          0.752
CAP53612.1
Rhs family protein (1850 aa)
 
          0.749
wxcB
Putative protein kinase; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase (762 aa)
 
      0.746
XCC1115
annotation not available (643 aa)
   
          0.728
XCC2016
Uncharacterized protein (394 aa)
   
          0.728
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (257 aa)
   
   
  0.721
XCC0439
annotation not available (221 aa)
   
          0.721
XCC0114
Transcriptional regulator; FOG- WD40 repeat (1172 aa)
 
          0.693
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants (239 aa)
   
     
  0.673
XCC4137
annotation not available (344 aa)
   
          0.667
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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