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XCC0456 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0456" - Opacity protein and related surface antigens in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0456Opacity protein and related surface antigens (279 aa)    
Predicted Functional Partners:
CAP49823.1
annotation not available (111 aa)
              0.723
xcsN
annotation not available (238 aa)
   
          0.722
oprN3
Outer membrane component of multidrug efflux pump; Outer membrane protein (467 aa)
   
     
  0.701
XCC3461
Uncharacterized protein; ATPases of the AAA+ class (982 aa)
   
        0.671
XCC1613
Integrase; Belongs to the ’phage’ integrase family (482 aa)
   
          0.647
CAP52012.1
Integrase (466 aa)
   
          0.637
xcsH
Type II secretion system protein H; General secretory pathway proteins G and H and related periplasmic/secreted proteins (174 aa)
   
          0.633
XCC1750
Outer membrane receptor for monomeric catechols (911 aa)
   
     
  0.608
CAP52479.1
Site-specific recombinase XerD (464 aa)
   
          0.608
xcsL
Type II secretory pathway component PulL (354 aa)
   
          0.604
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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