STRINGSTRING
XCC0510 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC0510" - Predicted transcriptional regulators in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0510Predicted transcriptional regulators (150 aa)    
Predicted Functional Partners:
gumE
GumE protein; Polymerization of the exopolysaccharide xanthan (432 aa)
   
          0.747
XCC3764
annotation not available (352 aa)
   
          0.713
gumF
GumF protein; Fucose 4-O-acetylase and related acetyltransferases (364 aa)
   
          0.710
XCC0197
Uncharacterized enzyme of heme biosynthesis (325 aa)
   
          0.699
XCC2267
annotation not available (229 aa)
   
     
  0.690
XCC2715
annotation not available (153 aa)
   
          0.678
XCC3763
annotation not available (179 aa)
   
          0.673
XCC0986
annotation not available (218 aa)
   
          0.672
gumG
GumG protein; Fucose 4-O-acetylase and related acetyltransferases (356 aa)
   
          0.671
hrpB1
annotation not available (151 aa)
   
          0.669
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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