STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC0510Predicted transcriptional regulators (150 aa)    
Predicted Functional Partners:
gumE
GumE protein; Polymerization of the exopolysaccharide xanthan
  
     0.747
XCC3764
annotation not available
  
     0.713
gumF
GumF protein; Fucose 4-O-acetylase and related acetyltransferases
  
     0.710
XCC0197
Uncharacterized enzyme of heme biosynthesis
  
     0.699
XCC2267
annotation not available
  
   
 0.690
XCC2715
annotation not available
  
     0.678
XCC3763
annotation not available
  
     0.673
XCC0986
annotation not available
  
     0.672
gumG
GumG protein; Fucose 4-O-acetylase and related acetyltransferases
  
     0.671
gumK
UDP-glucuronate:glycolipid 2-beta-glucuronosyltransferase; Catalyzes the transfer of a glucuronic acid (GlcA) residue from UDP-glucuronate to mannose-alpha-1,3-glucose-beta- 1,4-glucose-P-P-polyisoprenyl to form the lipid-linked tetrasaccharide GlcA-Man-Glc(2)-PP-Pol, with a glucuronic acid- beta-mannose linkage. Is involved in the biosynthesis of the exopolysaccharide xanthan, since it catalyzes the fourth glycosylation step in the assembly of the pentasaccharide-P-P- polyisoprenyl repeating unit of xanthan; Belongs to the glycosyltransferase 70 family
  
     0.669
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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