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STRINGSTRING
XCC3592 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3592" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3592annotation not available (172 aa)    
Predicted Functional Partners:
gnl1
Gluconolactonase (305 aa)
 
          0.916
XCC0386
annotation not available (111 aa)
   
          0.721
CAP49906.1
annotation not available (136 aa)
              0.629
XCC1245
Uncharacterized protein; Transposase and inactivated derivatives (180 aa)
   
          0.518
fecI
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily (169 aa)
              0.491
XCC2741
Bifunctional diaminopimelate decarboxylase/aspartate kinase; Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family (896 aa)
         
  0.482
fecR
Fe2+-dicitrate sensor, membrane component (341 aa)
              0.479
uidR
Transcriptional regulator (209 aa)
 
     
  0.451
rpoH
DNA-directed RNA polymerase sigma subunit (sigma70/sigma32) (291 aa)
       
      0.449
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth (624 aa)
       
      0.449
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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