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fecI protein (Xanthomonas campestris campestris) - STRING interaction network
"fecI" - DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fecIDNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily (169 aa)    
Predicted Functional Partners:
fecR
Fe2+-dicitrate sensor, membrane component (341 aa)
 
  0.994
fhuE2
Ferric pseudobactin M114 receptor protein; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid (842 aa)
 
   
  0.895
XCC3596
Uncharacterized iron-regulated membrane protein (540 aa)
 
          0.730
XCC3598
annotation not available (116 aa)
 
          0.701
XCC3597
annotation not available (106 aa)
 
          0.695
XCC1268
annotation not available (286 aa)
   
 
  0.667
CAP49906.1
annotation not available (136 aa)
              0.647
flgJ
Unnamed protein product (395 aa)
       
      0.600
XCC0674
Putative siderophore receptor; Outer membrane receptor proteins mostly Fe transport (722 aa)
 
   
  0.599
piuB
annotation not available (839 aa)
   
   
  0.572
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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