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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhuE2Ferric pseudobactin M114 receptor protein; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid (842 aa)    
Predicted Functional Partners:
XCC3596
Uncharacterized iron-regulated membrane protein
 
  
 0.936
fecR
Fe2+-dicitrate sensor, membrane component
 
  
 0.912
XCC3598
annotation not available
 
     0.911
XCC3597
annotation not available
 
     0.908
fecI
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily
 
  
 0.895
CAP49909.1
annotation not available
       0.697
XCC0139
Uncharacterized iron-regulated membrane protein
 
  
 0.678
XCC2867
Outer membrane receptor proteins mostly Fe transport
  
  
 0.661
piuB
annotation not available
 
  
 0.643
XCC0251
annotation not available
 
  
 0.618
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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