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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3596Uncharacterized iron-regulated membrane protein (540 aa)    
Predicted Functional Partners:
XCC3598
annotation not available
 
     0.951
XCC3597
annotation not available
 
     0.945
fhuE2
Ferric pseudobactin M114 receptor protein; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid
 
  
 0.936
fecR
Fe2+-dicitrate sensor, membrane component
 
     0.772
fhuE
Outer membrane receptor proteins, mostly Fe transport
 
  
 0.744
fecI
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily
 
     0.730
XCC0252
annotation not available
 
     0.727
XCC0250
annotation not available
    0.698
fpvA1
Outer membrane receptor for monomeric catechols
 
  
 0.653
CAP49909.1
annotation not available
       0.612
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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