STRINGSTRING
mdcY protein (Xanthomonas campestris campestris) - STRING interaction network
"mdcY" - Transcriptional regulators in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdcYTranscriptional regulators (239 aa)    
Predicted Functional Partners:
matC
Dicarboxylate carrier protein; Di- and tricarboxylate transporters (451 aa)
 
     
  0.812
mdcH
Malonyl CoA-ACP transacylase; Membrane protease subunits, stomatin/prohibitin homologs (306 aa)
 
          0.600
XCC2202
Uncharacterized protein; Exonuclease III (315 aa)
   
        0.538
mdcG
Phosphoribosyl-dephospho-CoA transferase; Transfers 2’-(5-triphosphoribosyl)-3’-dephosphocoenzyme- A to the apo-[acyl-carrier-protein] of the malonate decarboxylase to yield holo-[acyl-carrier-protein] (213 aa)
 
          0.480
mdcE
Malonate decarboxylase gamma subunit; Acetyl-CoA carboxylase alpha subunit (234 aa)
 
          0.450
citG
Probable 2-(5’’-triphosphoribosyl)-3’-dephosphocoenzyme-A synthase; Involved in the formation of 2-(5’’-phosphoribosyl)-3’- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase (388 aa)
 
          0.448
mdcD
Beta subunit of malonate decarboxylase; Acetyl-CoA carboxylase alpha subunit (304 aa)
 
          0.446
CAP51862.1
Signal transduction kinase (515 aa)
   
          0.416
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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