STRINGSTRING
CAP49937.1 protein (Xanthomonas campestris campestris) - STRING interaction network
"CAP49937.1" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAP49937.1annotation not available (222 aa)    
Predicted Functional Partners:
CAP49938.1
annotation not available (438 aa)
 
          0.977
CAP51033.1
annotation not available (136 aa)
   
          0.773
ptlE
Type IV secretion system, component VirB8 (335 aa)
   
          0.759
CAP51828.1
annotation not available (460 aa)
 
          0.738
ptlB
VirB3 protein; Type IV secretory pathway, VirB3 components (103 aa)
   
          0.723
ptlF
VirB9 protein; Type IV secretory pathway, VirB9 components (255 aa)
   
          0.714
virB6_2
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components (359 aa)
   
          0.710
XCC3783
annotation not available (186 aa)
   
          0.707
virB10
Type IV secretion system putative channel component VirB4; Type IV secretory pathway, VirB10 components (389 aa)
   
          0.702
virB6_1
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components (359 aa)
   
          0.699
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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