STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3567Uncharacterized protein conserved in bacteria (384 aa)    
Predicted Functional Partners:
XCC0955
Peptidyl-Asp metalloendopeptidase; Metalloprotease, specifically cleaves on the N-terminal side of aspartyl, glutamyl and cysteic acid residues
 
     0.745
XCC3568
annotation not available
       0.727
CAP53612.1
Rhs family protein
 
  
 0.714
XCC0047
annotation not available
  
     0.655
CAP51828.1
annotation not available
  
     0.629
CAP49962.1
annotation not available
       0.608
CAP53777.1
Predicted transcriptional regulators
  
     0.600
CAP49830.1
Uncharacterized conserved protein
  
     0.544
CAP49937.1
annotation not available
 
     0.544
XCC0521
Ribonuclease; Endonuclease I
  
     0.507
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (6%) [HD]