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STRINGSTRING
XCC3558 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3558" - Putative transmembrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3558Putative transmembrane protein; Predicted metal-dependent membrane protease (313 aa)    
Predicted Functional Partners:
XCC3557
annotation not available (179 aa)
 
          0.900
XCC1115
annotation not available (643 aa)
   
          0.621
hrpW
annotation not available (329 aa)
   
          0.552
XCC3555
Uncharacterized protein; Predicted hydrolase of the alpha/beta superfamily (339 aa)
 
          0.551
CAP49462.1
Unknown (90 aa)
   
          0.532
XCC0142
Uncharacterized protein; Lysophospholipase L1 and related esterases (304 aa)
   
          0.527
XCC3556
Aminopeptidase N (451 aa)
 
          0.525
XCC0303
annotation not available (342 aa)
   
          0.518
XCC3409
Nisin-resistance protein; Periplasmic protease (456 aa)
   
        0.515
pel4
Pectate lyase E; Degradation of external pectate (251 aa)
   
          0.512
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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