STRINGSTRING
XCC3539 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3539" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3539Uncharacterized protein; Predicted archaeal methyltransferase (400 aa)    
Predicted Functional Partners:
XCC3538
Uncharacterized protein; Permeases of the drug/metabolite transporter (DMT) superfamily (291 aa)
 
          0.660
XCC1836
annotation not available (82 aa)
   
          0.660
XCC2215
annotation not available (145 aa)
   
          0.589
XCC2197
annotation not available (109 aa)
   
          0.455
yybA
Transcriptional regulators (147 aa)
   
          0.415
XCC1122
annotation not available (186 aa)
   
          0.409
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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