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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
folHPredicted aminopeptidases (549 aa)    
Predicted Functional Partners:
XCC3157
Predicted aminopeptidases
 
     0.668
XCC4040
Uncharacterized protein conserved in bacteria
  
     0.665
XCC2407
annotation not available
  
     0.651
XCC1340
Outer membrane receptor proteins, mostly Fe transport
  
     0.639
XCC2408
Uncharacterized protein conserved in bacteria
  
     0.616
XCC1345
Uncharacterized protein conserved in bacteria
  
     0.570
XCC4016
Dipeptidyl-peptidase; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
 
  
 0.547
fhuE
Outer membrane receptor proteins, mostly Fe transport
       0.538
XCC3158
Predicted aminopeptidases
 
     0.536
XCC3961
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
  
    0.529
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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