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STRINGSTRING
XCC3510 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3510" - Putative salt-induced outer membrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3510Putative salt-induced outer membrane protein (266 aa)    
Predicted Functional Partners:
XCC2931
annotation not available (174 aa)
   
          0.661
uptE
Outer membrane protein; RTX toxins and related Ca2+-binding proteins (296 aa)
   
          0.614
XCC1144
annotation not available (168 aa)
   
          0.550
XCC1268
annotation not available (286 aa)
   
          0.549
XCC3509
Uncharacterized protein; Predicted transcriptional regulator (321 aa)
              0.512
XCC1572
annotation not available (228 aa)
   
          0.491
XCC2649
annotation not available (181 aa)
   
          0.467
XCC3743
Uncharacterized protein; Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC (352 aa)
   
          0.445
XCC1973
annotation not available (697 aa)
   
          0.431
XCC0986
annotation not available (218 aa)
   
          0.406
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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