STRINGSTRING
XCC3508 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3508" - Outer membrane lipoprotein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3508Outer membrane lipoprotein; Bacterial lipocalin (258 aa)    
Predicted Functional Partners:
XCC3875
Outer membrane lipoprotein Blc; Bacterial lipocalin (185 aa)
   
          0.729
XCC1328
annotation not available (181 aa)
   
          0.628
XCC1330
annotation not available (317 aa)
 
        0.575
cfa2
Uncharacterized protein; Cyclopropane fatty acid synthase and related methyltransferases (356 aa)
 
        0.559
XCC1331
Dehydrogenase; Predicted NAD/FAD-binding protein (416 aa)
 
        0.513
XCC1327
Predicted membrane protein (260 aa)
 
        0.496
cfa1
Cyclopropane fatty acid synthase and related methyltransferases (431 aa)
 
        0.439
XCC0256
annotation not available (127 aa)
   
          0.401
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (21%) [HD]