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STRINGSTRING
gph2 protein (Xanthomonas campestris campestris) - STRING interaction network
"gph2" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gph2Uncharacterized protein; Predicted phosphatases (195 aa)    
Predicted Functional Partners:
XCC3484
annotation not available (239 aa)
              0.810
XCC1827
annotation not available (97 aa)
   
          0.618
XCC0226
annotation not available (179 aa)
 
          0.518
ndpA
ndpA; Nucleoid-associated protein (393 aa)
   
          0.473
XCC1040
Uncharacterized protein; Transposase and inactivated derivatives (213 aa)
   
          0.448
CAP52669.1
Transposase and inactivated derivatives (207 aa)
   
          0.437
XCC3856
Uncharacterized protein (183 aa)
   
          0.422
XCC1318
annotation not available (151 aa)
   
     
  0.421
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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