STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3476Surface antigen protein (348 aa)    
Predicted Functional Partners:
XCC3477
Uncharacterized protein; Cytochrome c, mono- and diheme variants
 
 
 
 0.971
mxaF1
Methanol dehydrogenase heavy chain; Glucose dehydrogenase
 
     0.965
moxJ
annotation not available
 
   
 0.961
XCC3474
Outer membrane receptor for monomeric catechols
 
    0.931
adh
Zn-dependent alcohol dehydrogenases class III
       0.728
pqqC
Pyrroloquinoline-quinone synthase; Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ
 
     0.679
pqqE
Coenzyme PQQ synthesis protein E; Predicted Fe-S oxidoreductases; Belongs to the radical SAM superfamily. PqqE family
 
  
 0.678
pqqB
Coenzyme PQQ synthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm
 
     0.670
mxaF2
Glucose dehydrogenase
 
 
 
 0.609
XCC0114
Transcriptional regulator; FOG: WD40 repeat
 
 
 
 0.576
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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