• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
dacC protein (Xanthomonas campestris campestris) - STRING interaction network
"dacC" - Penicillin-binding protein 6 in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dacCPenicillin-binding protein 6; D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family (403 aa)    
Predicted Functional Partners:
mrdA
Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily (686 aa)
 
 
  0.920
mrcA
Membrane carboxypeptidase/penicillin-binding protein (811 aa)
         
  0.900
ftsW1
Peptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily (372 aa)
 
 
  0.855
XCC1132
Uncharacterized protein; D-alanyl-D-alanine carboxypeptidase (265 aa)
       
  0.848
XCC2329
Phosphate starvation-inducible protein PhoH predicted ATPase (328 aa)
            0.777
mltB
Membrane-bound lytic murein transglycosylase B (409 aa)
 
     
  0.754
rlpA
Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides (448 aa)
   
        0.726
ftsI
Peptidoglycan D,D-transpeptidase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum (623 aa)
 
  0.629
mreB
Rod shape-determining protein; Actin-like ATPase involved in cell morphogenesis (348 aa)
 
   
  0.568
mreC
Cell shape-determining protein (451 aa)
 
 
  0.537
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
Server load: low (26%) [HD]