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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbeFPre-B cell enhancing factor related protein; Nicotinic acid phosphoribosyltransferase (487 aa)    
Predicted Functional Partners:
nadM
Bifunctional NMN adenylyltransferase/nudix hydrolase; Nicotinamide mononucleotide adenylyltransferase; ADP-ribose pyrophosphatase
 
 
 0.999
nadD
Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
  
 
 0.921
XCC1718
Uncharacterized protein (competence- and mitomycin-induced); Belongs to the CinA family
  
 
 0.918
XCC1547
annotation not available
  
  
  0.918
nudC
NADH pyrophosphatase; NTP pyrophosphohydrolases containing a Zn-finger probably nucleic-acid-binding; Belongs to the Nudix hydrolase family
  
 
  0.907
XCC2881
Uncharacterized protein; Predicted pyrophosphatase
    
  0.902
surE
5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family
   
 
  0.901
rlhA
Inosine-uridine nucleoside N-ribohydrolase; Belongs to the IUNH family
     
  0.900
XCC3444
annotation not available
 
     0.881
XCC3443
Methyltransferase; DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family
       0.860
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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