STRINGSTRING
XCC3437 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3437" - Predicted periplasmic or secreted lipoprotein in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3437Predicted periplasmic or secreted lipoprotein (120 aa)    
Predicted Functional Partners:
ydgJ
Oxidoreductase; Predicted dehydrogenases (352 aa)
              0.713
osmC
Osmotically inducible protein; Predicted redox protein regulator of disulfide bond formation (144 aa)
     
   
  0.615
poxB
Pyruvate dehydrogenase; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase pyruvate dehydrogenase (cytochrome) glyoxylate carboligase phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family (575 aa)
     
   
  0.588
XCC0859
Tryptophan repressor binding protein; Multimeric flavodoxin WrbA; Belongs to the WrbA family (198 aa)
     
   
  0.562
otsB
Trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose (252 aa)
     
        0.555
XCC1318
annotation not available (151 aa)
 
          0.545
XCC3924
annotation not available (69 aa)
 
        0.494
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family (329 aa)
         
  0.492
XCC2946
DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family (183 aa)
   
        0.484
fliK
Flagellar hook-length control protein (426 aa)
   
     
  0.471
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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