STRINGSTRING
XCC3428 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3428" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3428annotation not available (494 aa)    
Predicted Functional Partners:
XCC3427
Outer membrane receptor proteins mostly Fe transport (884 aa)
 
          0.933
xcsC
Type II secretory pathway component PulC (270 aa)
 
          0.894
xcsD
Type II secretory pathway, component PulD (690 aa)
 
          0.856
xcsH
Type II secretion system protein H; General secretory pathway proteins G and H and related periplasmic/secreted proteins (174 aa)
 
          0.854
xcsL
Type II secretory pathway component PulL (354 aa)
 
          0.843
xcsK
Type II secretory pathway, component PulK (330 aa)
 
          0.841
xcsJ
Type II secretory pathway component PulJ (200 aa)
 
          0.841
xcsI
Type II secretory pathway, pseudopilin PulG (123 aa)
 
          0.800
xcsN
annotation not available (238 aa)
 
          0.716
xcsF
Type II secretory pathway component PulF (398 aa)
 
          0.705
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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