STRINGSTRING
xcsN protein (Xanthomonas campestris campestris) - STRING interaction network
"xcsN" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xcsNannotation not available (238 aa)    
Predicted Functional Partners:
xcsC
Type II secretory pathway component PulC (270 aa)
 
     
  0.953
xcsL
Type II secretory pathway component PulL (354 aa)
 
          0.945
xcsH
Type II secretion system protein H; General secretory pathway proteins G and H and related periplasmic/secreted proteins (174 aa)
 
          0.935
xcsM
Type II secretory pathway, component PulM (150 aa)
         
  0.927
xcsI
Type II secretory pathway, pseudopilin PulG (123 aa)
 
          0.921
xcsJ
Type II secretory pathway component PulJ (200 aa)
 
          0.915
xcsK
Type II secretory pathway, component PulK (330 aa)
 
          0.906
xcsG
Type II secretory pathway pseudopilin PulG (154 aa)
 
     
  0.904
xcsD
Type II secretory pathway, component PulD (690 aa)
 
     
  0.862
XCC3427
Outer membrane receptor proteins mostly Fe transport (884 aa)
 
          0.861
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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