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STRINGSTRING
XCC3414 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3414" - Transcriptional regulators in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3414Transcriptional regulators (255 aa)    
Predicted Functional Partners:
glmS1
Glucosamine-fructose-6-phosphate aminotransferase; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains (342 aa)
 
     
  0.900
nagA
N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family (384 aa)
 
     
  0.880
gluP1
Glucose/galactose transporter; Fucose permease (425 aa)
         
  0.823
XCC3412
Transcriptional regulators (365 aa)
 
 
 
  0.781
xcsF
Type II secretory pathway component PulF (398 aa)
     
      0.414
xcsN
annotation not available (238 aa)
              0.408
xcsM
Type II secretory pathway, component PulM (150 aa)
              0.408
xcsL
Type II secretory pathway component PulL (354 aa)
              0.408
xcsK
Type II secretory pathway, component PulK (330 aa)
              0.408
xcsJ
Type II secretory pathway component PulJ (200 aa)
              0.408
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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