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STRINGSTRING
XCC3412 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3412" - Transcriptional regulators in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3412Transcriptional regulators (365 aa)    
Predicted Functional Partners:
glmS1
Glucosamine-fructose-6-phosphate aminotransferase; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains (342 aa)
 
     
  0.932
nagA
N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family (384 aa)
 
     
  0.925
gluP1
Glucose/galactose transporter; Fucose permease (425 aa)
 
     
  0.912
XCC3414
Transcriptional regulators (255 aa)
 
 
 
  0.781
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2 (1490 aa)
       
 
  0.567
ptsH
Phosphotransferase system, HPr-related proteins (89 aa)
     
 
  0.536
clp
CRP-like protein Clp; Global transcriptional regulator that regulates virulence factors production by activating or repressing the expression of a large set of genes in diffusible signal factor (DSF) pathway. It includes, among others, genes involved in extracellular polysaccharide (EPS) synthesis, flagellum synthesis, protein and fatty acid metabolism, multidrug resistance, iron uptake or genes encoding extracellular enzymes, membrane components and a few transcription factors. Regulation can be direct or indirect, via regulation of other transcriptional regulators. Not involved in DS [...] (230 aa)
       
 
  0.499
glpR
Glycerol-3-phosphate regulon repressor; Transcriptional regulators of sugar metabolism (273 aa)
   
 
 
  0.443
bgl3
Glucan 1,4-beta-glucosidase; Beta-glucosidase-related glycosidases (870 aa)
 
      0.420
XCC3409
Nisin-resistance protein; Periplasmic protease (456 aa)
              0.410
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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