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STRINGSTRING
XCC3409 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3409" - Nisin-resistance protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3409Nisin-resistance protein; Periplasmic protease (456 aa)    
Predicted Functional Partners:
CAP49462.1
Unknown (90 aa)
   
          0.648
XCC4229
annotation not available (623 aa)
   
          0.644
XCC3310
annotation not available (261 aa)
   
          0.637
CAP52470.1
annotation not available (413 aa)
   
          0.627
XCC2588
Lipoprotein; Uncharacterized protein conserved in bacteria (345 aa)
   
          0.609
XCC3557
annotation not available (179 aa)
   
          0.585
XCC4048
annotation not available (768 aa)
   
          0.582
XCC0079
Uncharacterized protein; Predicted permease (346 aa)
   
          0.580
XCC0677
annotation not available (344 aa)
   
          0.529
XCC1115
annotation not available (643 aa)
   
          0.522
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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