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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3401Uncharacterized protein; Metal-dependent hydrolase (245 aa)    
Predicted Functional Partners:
dsbA1
Thiol:disulfide interchange protein; Thiol-disulfide isomerase and thioredoxins
 
     0.751
XCC3261
annotation not available
  
     0.629
betT
Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family
 
     0.600
gcvR
Glycine cleavage system transcriptional repressor; Unnamed protein product
  
     0.574
dsbA2
Thiol:disulfide interchange protein; Thiol-disulfide isomerase and thioredoxins
       0.561
thiS
Sulfur transfer protein involved in thiamine biosynthesis
  
     0.555
ftsL
Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
  
     0.475
XCC3403
NAD/NADP-dependent betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid
       0.465
XCC2919
Chemotaxis signal transduction protein
  
     0.431
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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