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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dsbA1Thiol:disulfide interchange protein; Thiol-disulfide isomerase and thioredoxins (273 aa)    
Predicted Functional Partners:
dsbB
Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
 
 
 0.971
dsbA2
Thiol:disulfide interchange protein; Thiol-disulfide isomerase and thioredoxins
 
  
 
0.926
dsbD
C-type cytochrome biogenesis protein; Thiol:disulfide interchange protein
  
 
 0.896
dsbC
Thiol:disulfide interchange protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
  
 
 
 0.774
XCC3401
Uncharacterized protein; Metal-dependent hydrolase
 
     0.751
nfuA
Fe/S biogenesis protein NfuA; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins
   
  
 0.705
XCC3983
Thioredoxin; Thiol-disulfide isomerase and thioredoxins
 
 
 0.677
XCC3398
Cytochrome c553
 
   
 0.668
XCC0082
Thioredoxin; Thiol-disulfide isomerase and thioredoxins
  
 
 0.627
XCC1180
Thioredoxin; Thiol-disulfide isomerase and thioredoxins
  
 
 0.627
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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