STRINGSTRING
XCC3398 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3398" - Cytochrome c553 in Xanthomonas campestris campestris
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3398Cytochrome c553 (265 aa)    
Predicted Functional Partners:
petC
Cytochrome c1 (247 aa)
   
     
  0.859
XCC0254
Cytochrome c5 (172 aa)
 
   
  0.848
petA
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (214 aa)
 
     
  0.771
petB
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis (419 aa)
 
     
  0.759
engB
Probable GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation (222 aa)
              0.735
dsbA2
Thiol-disulfide interchange protein; Thiol-disulfide isomerase and thioredoxins (216 aa)
 
     
  0.681
dsbA1
Thiol-disulfide interchange protein; Thiol-disulfide isomerase and thioredoxins (273 aa)
 
     
  0.668
XCC3827
SURF1-like protein (241 aa)
   
          0.596
fadH
NADH-flavin oxidoreductases Old Yellow Enzyme family (679 aa)
     
 
  0.555
XCC4133
annotation not available (506 aa)
     
 
  0.539
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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