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STRINGSTRING
XCC3393 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3393" - Uncharacterized protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3393Uncharacterized protein; Glycosyltransferase (365 aa)    
Predicted Functional Partners:
XCC2401
annotation not available (784 aa)
 
      0.763
XCC1656
Uncharacterized protein; Cytochrome c biogenesis factor (242 aa)
   
          0.762
XCC3395
Two-component system sensor protein; Signal transduction histidine kinase (498 aa)
 
        0.760
ccmD
Heme exporter protein D; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes (67 aa)
   
          0.704
XCC1554
Predicted membrane protein (731 aa)
   
          0.701
avrBs2
Avirulence protein; Glycerophosphoryl diester phosphodiesterase,probable (718 aa)
   
        0.658
XCC1682
Serine kinase of the HPr protein, regulates carbohydrate metabolism (347 aa)
   
          0.655
XCC1668
annotation not available (448 aa)
   
          0.642
hrpB1
annotation not available (151 aa)
   
          0.641
XCC3394
Two-component system regulatory protein; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain (280 aa)
              0.626
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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