STRINGSTRING
celS1 protein (Xanthomonas campestris campestris) - STRING interaction network
"celS1" - Glycoside hydrolase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celS1Glycoside hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family (271 aa)    
Predicted Functional Partners:
engXCA
Major extracellular endoglucanase; Endoglucanase (484 aa)
   
     
  0.771
xcsN
annotation not available (238 aa)
   
     
  0.752
hpaP
annotation not available (203 aa)
   
          0.725
XCC0684
Serine protease; Function unknown (552 aa)
   
          0.718
uidR
Transcriptional regulator (209 aa)
   
          0.705
virB6_2
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components (359 aa)
   
          0.701
hrpF
HrpF protein; Pathogenicity-related export of effector proteins to host plants (921 aa)
   
     
  0.693
virB6_1
VirB6-like membrane protein; Type IV secretory pathway, VirB6 components (359 aa)
   
          0.691
hrpW
annotation not available (329 aa)
   
          0.676
CAP51033.1
annotation not available (136 aa)
   
          0.669
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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