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STRINGSTRING
celS2 protein (Xanthomonas campestris campestris) - STRING interaction network
"celS2" - Glycoside hydrolase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celS2Glycoside hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family (262 aa)    
Predicted Functional Partners:
hpaP
annotation not available (203 aa)
   
          0.682
hrpF
HrpF protein; Pathogenicity-related export of effector proteins to host plants (921 aa)
   
          0.670
hrpW
annotation not available (329 aa)
   
          0.659
uidR
Transcriptional regulator (209 aa)
   
          0.633
XCC3535
Cellulase; Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family (666 aa)
 
   
  0.630
XCC2436
Uncharacterized protein (194 aa)
   
          0.608
hrcQ
HrcQ protein; Type III secretory pathway protein (335 aa)
   
          0.596
XCC0431
Nuclease; Predicted extracellular nuclease (1193 aa)
   
        0.593
XCC4063
annotation not available (196 aa)
   
          0.560
CAP53612.1
Rhs family protein (1850 aa)
     
 
  0.545
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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