STRINGSTRING
XCC3376 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3376" - annotation not available in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3376annotation not available (123 aa)    
Predicted Functional Partners:
XCC3375
annotation not available (180 aa)
              0.845
XCC2271
annotation not available (281 aa)
   
          0.697
XCC1401
annotation not available (300 aa)
   
          0.615
XCC1041
Outer membrane receptor proteins, mostly Fe transport (1034 aa)
   
          0.547
lgtB
Glycosyltransferase involved in LPS biosynthesis (269 aa)
   
          0.547
XCC4124
annotation not available (117 aa)
   
          0.534
XCC3209
Outer membrane receptor proteins mostly Fe transport (926 aa)
   
          0.517
XCC4126
annotation not available (190 aa)
   
          0.500
XCC3758
annotation not available (214 aa)
   
          0.487
XCC0802
annotation not available (342 aa)
   
          0.478
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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