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suh protein (Xanthomonas campestris campestris) - STRING interaction network
"suh" - Amylosucrase or alpha amylase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
suhAmylosucrase or alpha amylase; Glycosidases (637 aa)    
Predicted Functional Partners:
aglA1
Alpha-glucosidase; Glycosidases (538 aa)
   
   
0.920
XCC2468
Alpha-glucosidase (692 aa)
   
 
  0.912
susB
annotation not available (654 aa)
   
 
  0.911
suxA
Outer membrane receptor proteins, mostly Fe transport (818 aa)
 
     
  0.882
glgY
Maltooligosyl trehalose synthase (872 aa)
 
   
  0.811
sdaA
L-serine dehydratase; Unnamed protein product (490 aa)
 
       
  0.743
XCC3357
Sugar transporter; Permeases of the major facilitator superfamily (444 aa)
 
     
  0.678
scrK
Fructokinase; Sugar kinases, ribokinase family (352 aa)
   
   
  0.673
suxR
Transcriptional regulators (406 aa)
 
   
  0.673
treS
Trehalose synthase; Glycosidases (1116 aa)
 
 
0.626
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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