STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3357Sugar transporter; Permeases of the major facilitator superfamily (444 aa)    
Predicted Functional Partners:
suxA
Outer membrane receptor proteins, mostly Fe transport
 
   
 0.808
XCC2464
Maltose transport gene repressor; Transcriptional regulators
 
   
 0.703
suh
Amylosucrase or alpha amylase; Glycosidases
 
   
 0.678
suxR
Transcriptional regulators
 
   
 0.669
yieO
Drug resistance translocase; Permeases of the major facilitator superfamily
      
 0.605
XCC2342
Transport protein; Permeases of the major facilitator superfamily
     
 0.605
XCC2469
Outer membrane receptor proteins mostly Fe transport
 
   
 0.565
XCC2468
Alpha-glucosidase
 
     0.536
aroG
Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
     
 0.486
kgtP
Dicarboxylate transport protein; Permeases of the major facilitator superfamily
     
 0.485
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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