close STRING Data Update
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
suxRTranscriptional regulators (406 aa)    
Predicted Functional Partners:
XCC1437
Transcriptional regulator
      
 0.705
suh
Amylosucrase or alpha amylase; Glycosidases
 
  
 0.673
XCC3357
Sugar transporter; Permeases of the major facilitator superfamily
 
   
 0.669
suxA
Outer membrane receptor proteins, mostly Fe transport
 
   
 0.660
gltB
Glutamate synthase, alpha subunit; Glutamate synthase domain 2
    
 
 0.567
phbB
Acetoacetyl-coA reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
   
   0.545
ptsH
Phosphotransferase system, HPr-related proteins
   
 
 0.536
glpR
Glycerol-3-phosphate regulon repressor; Transcriptional regulators of sugar metabolism
  
 
 
 0.504
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer
 
   
 0.476
suc
Transport protein; Permeases of the major facilitator superfamily
 
   
 0.447
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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