STRINGSTRING
XCC3342 protein (Xanthomonas campestris campestris) - STRING interaction network
"XCC3342" - Putative alpha-1,2-mannosidase in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3342Putative alpha-1,2-mannosidase (1119 aa)    
Predicted Functional Partners:
XCC3341
Uncharacterized protein conserved in bacteria (155 aa)
              0.609
waaL
Membrane protein; Lipid A core - O-antigen ligase and related enzymes (444 aa)
              0.600
XCC3340
Glycosyl transferase; Unnamed protein product (370 aa)
              0.600
nahA
N-acetyl-beta-hexosaminidase (827 aa)
 
          0.597
XCC3447
Uncharacterized protein; Metal-dependent hydrolase (288 aa)
   
          0.537
XCC2028
Uncharacterized protein; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) (654 aa)
 
          0.528
XCC2893
Uncharacterized protein (505 aa)
   
  0.503
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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