STRINGSTRING
waaL protein (Xanthomonas campestris campestris) - STRING interaction network
"waaL" - Membrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
waaLMembrane protein; Lipid A core - O-antigen ligase and related enzymes (444 aa)    
Predicted Functional Partners:
XCC3340
Glycosyl transferase; Unnamed protein product (370 aa)
 
     
  0.918
XCC3341
Uncharacterized protein conserved in bacteria (155 aa)
              0.880
XCC2431
annotation not available (159 aa)
   
          0.781
XCC2250
annotation not available (196 aa)
   
          0.775
XCC0193
annotation not available (300 aa)
   
          0.766
XCC2866
annotation not available (288 aa)
   
          0.762
XCC1742
annotation not available (172 aa)
   
        0.758
XCC1129
annotation not available (393 aa)
   
          0.757
XCC2390
annotation not available (161 aa)
   
          0.747
XCC3899
annotation not available (120 aa)
   
          0.743
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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