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raxC protein (Xanthomonas campestris campestris) - STRING interaction network
"raxC" - Outer membrane protein in Xanthomonas campestris campestris
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
raxCOuter membrane protein (457 aa)    
Predicted Functional Partners:
mexA
Multidrug resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (399 aa)
 
  0.991
toxH
Acriflavin resistance protein; Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family (1041 aa)
   
  0.953
XCC2368
Cation/multidrug efflux pump (1056 aa)
 
  0.946
acrA2
Multidrug resistance protein; Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (436 aa)
 
  0.945
toxG
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (361 aa)
 
  0.936
pcm
Protein-L-isoaspartate carboxylmethyltransferase (218 aa)
 
     
  0.904
oprN2
Outer membrane protein (497 aa)
         
0.814
mexF
Cation/multidrug efflux pump (1075 aa)
   
 
  0.772
tptC
ABC transporter ATP-binding protein; ABC-type antimicrobial peptide transport system, ATPase component (229 aa)
   
 
  0.755
surA
Chaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation (463 aa)
   
 
  0.741
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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