STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XCC3313annotation not available (160 aa)    
Predicted Functional Partners:
XCC1401
annotation not available
  
     0.735
XCC1169
annotation not available
  
     0.661
XCC3589
annotation not available
  
     0.645
XCC1583
annotation not available
  
     0.645
XCC1668
annotation not available
  
     0.616
XCC1682
Serine kinase of the HPr protein, regulates carbohydrate metabolism
  
     0.614
XCC0047
annotation not available
  
     0.605
XCC0155
annotation not available
  
     0.602
XCC3823
Disulphide-isomerase; Thiol-disulfide isomerase and thioredoxins
  
     0.600
XCC2941
annotation not available
  
     0.587
Your Current Organism:
Xanthomonas campestris campestris
NCBI taxonomy Id: 340
Other names: X. campestris pv. campestris, Xanthomonas campestris, Xanthomonas campestris (pv. campestris), Xanthomonas campestris campestris, Xanthomonas campestris pv. campestris
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